A Tale of Two Structures

Submitted by Chip Nataro / Lafayette College on Tue, 08/12/2014 - 10:32
Description

In this activity, students will compare and contrast two closely related structures, [Pd(dcpf)PR3]2+ (dcpf = 1,1'-bis(dicyclohexylphosphino)ferrocene; R = Me or Ph). They will be required to obtain the cif files from the supporting information of a paper. They will then make a variety of measurments in the two stuctures. These measurements can be made using a variety of different freely available programs. Instructions are provided for Mercury 3.3 and Olex2. Finally, students will be required to provide a rationale for the differences in the two structures.

Suite of LOs on Biomimetic Modeling

Submitted by Sheila Smith / University of Michigan- Dearborn on Mon, 08/04/2014 - 09:52

This suite of activities can be used as a unit exploring the use of small molecule models and biophysical techniques to illuminate complicated biomolecules.  The Parent LO:  Modeling the FeB center in bacterial Nitric Oxide reductase is a short, data-filled and well-written article that is approachable with an undergraduate's level of understanding.

Five Slides About Magnetic Susceptibility

Submitted by Sibrina Collins / College of Arts and Sciences at Lawrence Technological University on Tue, 07/29/2014 - 12:38
Description

This Five Slides About provides an overview of the concept of magnetic susceptibility for paramagnetic metal centers. Three methods are discussed, namely the Evans NMR Method, the magnetic balance and SQUID (Superconducting QUantum Interference Device). The availability of each method varies across institutions.

Modeling post-translational modification in cobalt nitrile hydratase with a metallopeptide from Anne Jones

Submitted by Kari Young / Centre College on Thu, 07/17/2014 - 16:23
Description

In this literature discussion, students read a paper about a cobalt metallopeptide that imitates the active site of the enzyme nitrile hydratase.  Specifically, the model complex is oxidized by air to produce a coordination sphere with both cysteine thiolate and sulfinic acid ligands, much like the post-translationally oxidized cysteine ligands in the biological system.

Utilizing the PDB and HSAB theory to understand metal specificity in trafficking proteins

Submitted by EGunn / Simmons College on Thu, 07/17/2014 - 15:19
Description

This is an in-class PDB exercise based on the paper "Mechanisms Controlling the Cellular Metal Economy" by Gilston and O'Halloran. Students are asked to visualize the metal binding sites of several proteins discussed in the paper, highlighting unusual metal geometries. After identifying the amino acid residues involved in metal binding, students will discuss the bond structure in terms of HSAB theory. 

The Synthesis and Characterization of a trans-Dioxorhenium(V) Complex

Submitted by Sibrina Collins / College of Arts and Sciences at Lawrence Technological University on Mon, 07/14/2014 - 12:31
Description

This experiment involves the preparation of a key starting reactant in high purity and yield for an ongoing research project, specifically for the development of potential photodynamic therapy (PDT) agents. The students synthesize [ReO2(py)4]Cl.2H2O using standard inorganic synthesis techniques. The students visualize the vibrations and electronic properties (e.g. molecular orbitals) of the compound using output files generated from density functional theory (DFT).

Inorganic Spectroscopy Introduced Using an Interactive PhET Simulation (Part 2)

Submitted by Alycia Palmer / The Ohio State University on Mon, 07/14/2014 - 09:06
Description

This is the second part of a two-day class discussion on molecular and inorganic spectroscopy. In this activity, upper level students learn about spectroscopic tecniques used in inorganic chemistry and then devise an experiment to follow the progress of a hypothetical reaction. The activity also prepares students for the inorganic laboratory "Linkage isomerism of nitrogen dioxide" in which infrared spectroscopy is used to monitor changes to the N-O vibrational stretch upon coordination to a metal.

Inorganic Spectroscopy Introduced Using an Interactive PhET Simulation (Part 1)

Submitted by Alycia Palmer / The Ohio State University on Wed, 04/30/2014 - 20:49
Description

A guided-inquiry activity for the interactive PhET simuation "Molecules and Light" was created to introduce upper-level inorganic laboratory students to inorganic spectroscopy. The activity included here is the first part of a two-day discussion. This activity instructs students to use the PhET simulation "Molecules and Light" to explore how various molecules interact with different energies of electromagnetic radiation (microwave, infrared, visible, ultraviolet). This activity can also be used in a general chemistry setting as the topics discussed are very basic.

Symmetry Lectures

Submitted by Sabrina Sobel / Hofstra University on Sat, 03/08/2014 - 16:00
Description

Two excellent video presentations on symmetry. The Ted Talk by Marcus du Sautoy is an excellent introduction to the concept of symmetry and systematically describing it. In "Impossible Crystals" Nobel Laureate and physicist Paul Steinhardt discusses the creation of "Impossible crystals": quasi-crystals with five-fold symmetry previously believed impossible.