Cadmium Carbonic Anhydrase (CdCA): Sustaining Life Using a Toxic Metal Ion

Submitted by Peter Craig / McDaniel College on Tue, 07/15/2014 - 01:18
Description

The Diatom Thalassiosira weissflogii is very resilient.  It thrives in poor quality water, where high CO2 levels, chlorine and cadmium ion concentrations, and pH are observed.  How is it possible for cadmium ions to be a nutrient for this diatom, when it is normally seen as a toxin in biological systems?

This LO introduces students to bioinorganic chemistry using the enzyme carbonic anhydrase to illustrate biodiversity, adaptation, HASB theory, metal ion ligand bonding as represented by the PDB using Ligand Explorer, and more.

Employing 2D NMR and NOE to assign protons in an organometallic complex

Submitted by Sherzod / Northwestern University on Mon, 07/14/2014 - 18:00
Description

The following paper will be given to the students to read at home along with the questions in the attached document. Students will be allowed to discuss their answers in small groups and refine their answers, before the corresct answer is revealed.

Origins of Enantioselectivity during Allylic Substitution Reactions Catalyzed by Metallacyclic Iridium Complexes.

J. Am. Chem. Soc., 2012, 134 (19), pp 8136–8147

DOI: 10.1021/ja212217j

The Synthesis and Characterization of a trans-Dioxorhenium(V) Complex

Submitted by Sibrina Collins / College of Arts and Sciences at Lawrence Technological University on Mon, 07/14/2014 - 12:31
Description

This experiment involves the preparation of a key starting reactant in high purity and yield for an ongoing research project, specifically for the development of potential photodynamic therapy (PDT) agents. The students synthesize [ReO2(py)4]Cl.2H2O using standard inorganic synthesis techniques. The students visualize the vibrations and electronic properties (e.g. molecular orbitals) of the compound using output files generated from density functional theory (DFT).

Hard Soft Acid Base Theory - Coordination Trends in Alkali Metal Crown Ether Uranyl Halide Complexes: The Series [A(Crown)]2[UO2X4] Where A = Li, Na, K, and X = Cl, Br

Submitted by Gerard Rowe / University of South Carolina Aiken on Tue, 07/01/2014 - 11:13
Description

In this literature discussion, students are asked to read an article describing a series of uranyl halide compounds that contain an alkali counterion that interacts with one or more of the uranium's ligand atoms.  This paper stands out as a great example of the binding preferences of acids and bases, and can be explained very well using simple HSAB concepts.

Learning Objects used at the 2014 VIPEr Workshop on Bioinorganic Chemistry

Submitted by Betsy Jamieson / Smith College on Wed, 06/25/2014 - 09:32

This collection highlights the learning objects used at the 2014 VIPEr workshop on the Bioinorganic Applications of Coordination Chemistry to introduce participants to the field of bioinorganic chemistry.   They provide essential background information on how metals bind to proteins as well as the techniques used in the research papers presented at the workshop.  A list of learning objects created at the workshop based on the current research of our expert speakers can be found at: 

Properties of olefin complexes: Pt(II) vs Au(III)

Submitted by Margaret Scheuermann / Western Washington University on Sat, 06/21/2014 - 22:01
Description

This is a literature discussion based on a paper titled “Generation and Structural Characterization of a Gold(III) Alkene Complex” (Angew. Chem. Int. Ed. 2013, 52, 1660 - DOI 10.1002/anie.201209140) that reports the first crystallographically characterized Au(III) alkene complex, [(cod)AuMe2] [BArF]. The synthesis and characterization of [(cod)AuMe2] [BArF] are presented. The structural properties are compared to those of the isoelectronic species (cod)PtMe2, and to free cod.

Complexes of alkenes, alkynes, and dienes

Submitted by Margaret Scheuermann / Western Washington University on Sat, 06/21/2014 - 21:35
Description

These slides provide an outline of the significance, bonding, properties, and reactivity of metal alkene, alkyne, and diene complexes appropriate for an upper division organometallics class. Animation is used to construct qualitative MO diagrams for olefins bound to octahedral metal centers that highlight specific bonding and antibonding interactions.

The chemdraw file used to create these slides is also provided.

Exploring Proteins as Ligands using the Protein Data Bank

Submitted by Betsy Jamieson / Smith College on Tue, 06/17/2014 - 15:23
Description

This in class activity is designed to introduce students to how amino acid side chains can coordinate metal ions in proteins.  It guides students through the exploration of several metal binding sites in proteins using the Ligand Explorer program on the Protein Data Bank (PDB) website.  Essentially, it is a way for them to use the PDB to “discover” the information generally presented on this topic in the introductory chapters of bioinorganic textbooks.  At the end it asks students to think about Hard Soft Acid Base theory and to see how that can be applied to the binding of metals in protei

A Review of 3DMolSym: A Web Resource for Teaching Molecular Symmetry

Submitted by Marion Cass / Carleton College on Fri, 05/23/2014 - 19:22
Description

Introducing you to 3DMolSym:  A Web Resource for Teaching Molecular Symmetry that uses Adobe Shockwave for Visualizations and Animations.

Note there is a slight difference when operating this resource on a Mac or in a Windows Operating Systerm.  On a Mac if you don't change an item (any item) in the pull down menu on the right when the resouce opens, the selection of molecules will be frame shifted by one molecule.  An easy fix is described in the Description below.

The Structure and Symmetry of Metal Tris Chelates

Submitted by Marion Cass / Carleton College on Fri, 05/23/2014 - 15:59
Description

I have provided a link to a Web Resource:  The Strucutre and Symmetry of Metal Tris Chelates which I developed several years ago with my collegue Henry Rzepa from Imperial College London (and which was posted as Web Ware on the Jourmal of Chemical Education Website and is not longer available to view there).  The Web site uses 3D images of known molecules and scripted commands to teach about the symmetry elements and operations in these molecules.  Instruction is also given on assigning absolute configurations and ligand twist conformations.  Animations of the Bailar Twist and Ray Dutt Mech

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