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checkCIF/PLATON (full publication check)
Structure factors have been supplied for datablock(s) exp_324
THIS REPORT IS FOR GUIDANCE ONLY. IF USED AS PART OF A REVIEW PROCEDURE FOR PUBLICATION, IT SHOULD NOT REPLACE THE EXPERTISE OF AN EXPERIENCED CRYSTALLOGRAPHIC REFEREE.
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Structure factor report
Datablock: exp_324
Bond precision: |
C-C = 0.0050 A |
Wavelength=0.71073 |
Cell: |
a=11.49946(14) |
b=13.43359(17) |
c=23.3392(3) |
|
alpha=90 |
beta=90 |
gamma=90 |
Temperature: |
293 K |
|
|
|
Calculated |
Reported |
Volume |
3605.42(8)
|
3605.42(7) |
Space group |
P b c a |
P b c a |
Hall group |
-P 2ac 2ab |
-P 2ac 2ab |
Moiety formula |
C6 H24 Co N6, 3(I), H2 O
|
3(I), C6 H24 Co N6, 1(H2 O1)
|
Sum formula |
C6 H26 Co I3 N6 O
|
C6 H26 Co I3 N6 O
|
Mr |
637.96 |
637.96 |
Dx,g cm-3 |
2.351 |
2.351 |
Z |
8 |
8 |
Mu (mm-1) |
6.088 |
6.088 |
F000 |
2384.0 |
2384.0 |
F000' |
2376.12
|
|
h,k,lmax |
16,19,33 |
16,19,33 |
Nref |
5626 |
5578 |
Tmin,Tmax |
0.052,0.111 |
0.708,0.801 |
Tmin' |
0.014 |
|
Correction method= # Reported T Limits: Tmin=0.708 Tmax=0.801 AbsCorr = ANALYTICAL |
|
Data completeness= 0.991 |
Theta(max)= 30.760 |
R(reflections)= 0.0283( 5091) |
wR2(reflections)= 0.0595( 5578) |
The following ALERTS were generated. Each ALERT has the format
test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.
Alert level B
PLAT420_ALERT_2_B D-H Without Acceptor O1A --H1AA . Please Check
PLAT480_ALERT_4_B Long H...A H-Bond Reported H6D ..N2 . 3.08 Ang.
Alert level C
PLAT420_ALERT_2_C D-H Without Acceptor N5 --H5A . Please Check
PLAT480_ALERT_4_C Long H...A H-Bond Reported H1C ..O1 . 2.70 Ang.
PLAT481_ALERT_4_C Long D...A H-Bond Reported C6 ..N2 3.90 Ang.
PLAT761_ALERT_1_C CIF Contains no X-H Bonds ...................... Please Check
PLAT762_ALERT_1_C CIF Contains no X-Y-H or H-Y-H Angles .......... Please Check
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 4.086 Check
PLAT971_ALERT_2_C Check Calcd Resid. Dens. 0.67A From I3 1.56 eA-3
PLAT972_ALERT_2_C Check Calcd Resid. Dens. 0.59A From I3 -1.87 eA-3
PLAT972_ALERT_2_C Check Calcd Resid. Dens. 0.66A From I3 -1.61 eA-3
PLAT977_ALERT_2_C Check Negative Difference Density on H3B -0.33 eA-3
Alert level G
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 16 Report
PLAT012_ALERT_1_G No _shelx_res_checksum Found in CIF ...... Please Check
PLAT042_ALERT_1_G Calc. and Reported MoietyFormula Strings Differ Please Check
PLAT063_ALERT_4_G Crystal Size Possibly too Large for Beam Size .. 0.65 mm
PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large 9.38 Why ?
PLAT199_ALERT_1_G Reported _cell_measurement_temperature ..... (K) 293 Check
PLAT200_ALERT_1_G Reported _diffrn_ambient_temperature ..... (K) 293 Check
PLAT302_ALERT_4_G Anion/Solvent/Minor-Residue Disorder (Resd 5 ) 100% Note
PLAT302_ALERT_4_G Anion/Solvent/Minor-Residue Disorder (Resd 6 ) 100% Note
PLAT304_ALERT_4_G Non-Integer Number of Atoms in ..... (Resd 5 ) 1.61 Check
PLAT304_ALERT_4_G Non-Integer Number of Atoms in ..... (Resd 6 ) 1.39 Check
PLAT417_ALERT_2_G Short Inter D-H..H-D H1B ..H1F . 1.98 Ang.
x,y,z = 1_555 Check
PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 2 Note
PLAT794_ALERT_5_G Tentative Bond Valency for Co1 (III) . 3.33 Info
PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 1 Note
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 48 Note
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 2 Info
0 ALERT level A = Most likely a serious problem - resolve or explain
2 ALERT level B = A potentially serious problem, consider carefully
12 ALERT level C = Check. Ensure it is not caused by an omission or oversight
17 ALERT level G = General information/check it is not something unexpected
6 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
9 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
12 ALERT type 4 Improvement, methodology, query or suggestion
2 ALERT type 5 Informative message, check
checkCIF publication errors
Alert level A
PUBL004_ALERT_1_A The contact author's name and address are missing,
_publ_contact_author_name and _publ_contact_author_address.
PUBL005_ALERT_1_A _publ_contact_author_email, _publ_contact_author_fax and
_publ_contact_author_phone are all missing.
At least one of these should be present.
PUBL006_ALERT_1_A _publ_requested_journal is missing
e.g. 'Acta Crystallographica Section C'
PUBL008_ALERT_1_A _publ_section_title is missing. Title of paper.
PUBL009_ALERT_1_A _publ_author_name is missing. List of author(s) name(s).
PUBL010_ALERT_1_A _publ_author_address is missing. Author(s) address(es).
PUBL012_ALERT_1_A _publ_section_abstract is missing.
Abstract of paper in English.
7 ALERT level A = Data missing that is essential or data in wrong format
0 ALERT level G = General alerts. Data that may be required is missing
Publication of your CIF
You should attempt to resolve as many as possible of the
alerts in all categories. Often the minor alerts point to easily fixed
oversights, errors and omissions in your CIF or refinement strategy, so
attention to these fine details can be worthwhile. In order to resolve some
of the more serious problems it may be necessary to carry out additional
measurements or structure refinements. However, the nature of your study may
justify the reported deviations from journal submission requirements
and the more serious of these should be commented upon in the discussion or experimental
section of a paper or in the "special_details" fields of the CIF.
checkCIF was carefully designed to identify outliers and unusual
parameters, but every test has its limitations and alerts that are not
important in a particular case may appear. Conversely, the absence of
alerts does not guarantee there are no aspects of the results needing
attention. It is up to the individual to critically assess their own
results and, if necessary, seek expert advice.
If level A alerts remain, which you believe to be justified deviations, and
you intend to submit this CIF for publication in a journal,
you should additionally insert an explanation in your CIF using the
Validation Reply Form (VRF) below. This will allow your explanation to be considered
as part of the review process.
|
Validation response formPlease find below a validation response form (VRF) that can be filled in and pasted into your CIF.
# start Validation Reply Form
_vrf_PUBL004_GLOBAL
;
PROBLEM: The contact author's name and address are missing,
RESPONSE: ...
;
_vrf_PUBL005_GLOBAL
;
PROBLEM: _publ_contact_author_email, _publ_contact_author_fax and
RESPONSE: ...
;
_vrf_PUBL006_GLOBAL
;
PROBLEM: _publ_requested_journal is missing
RESPONSE: ...
;
_vrf_PUBL008_GLOBAL
;
PROBLEM: _publ_section_title is missing. Title of paper.
RESPONSE: ...
;
_vrf_PUBL009_GLOBAL
;
PROBLEM: _publ_author_name is missing. List of author(s) name(s).
RESPONSE: ...
;
_vrf_PUBL010_GLOBAL
;
PROBLEM: _publ_author_address is missing. Author(s) address(es).
RESPONSE: ...
;
_vrf_PUBL012_GLOBAL
;
PROBLEM: _publ_section_abstract is missing.
RESPONSE: ...
;
# end Validation Reply Form
If you wish to submit your CIF for publication in Acta
Crystallographica Section C or E, you should upload your CIF via
the web.
If you wish to submit your CIF for publication in IUCrData
you should upload your CIF via
the web.
If your CIF is to form part of a submission to another
IUCr journal, you will be asked, either during electronic submission or
by the Co-editor handling your paper, to upload your CIF via our web site.
|
PLATON version of 05/12/2020; check.def file version of 05/12/2020
Datablock exp_324 - ellipsoid plot |
|
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